EcopanGEM Browser

Interactive explorer for 2,313 E. coli strain-specific genome-scale metabolic models (GEMs)

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How to use: Filter or search the table to find GEMs of interest. Click the Columns button to show/hide metadata columns. Click rows to select them, then use "Copy Selected GEM Filenames" to get the exact filenames inside the Zenodo archive (Ecoli_GEMs_for_Complete_genomes.zip). To extract specific GEMs: unzip Ecoli_GEMs_for_Complete_genomes.zip "Ecoli_GEMs_for_Complete_genomes/562.12345.json.json"